With this, you will obtain an instance operating in a degraded mode, which lacks features such as authentication, S3 explorer, secret management, etc. However, you will still have the capability to launch services from the catalog.
Step by step installation guide
In this section, we will set up Onyxia from the ground up, along with all the associated technologies. This includes MinIO for S3, Keycloak for OIDC, and Vault for managing secrets.
Provision a Kubernetes cluster
First you'll need a Kubernetes cluster. If you have one already you can skip this section.
Let's assume you own the domain name my-domain.net, for the rest of the guide you should replace my-domain.net by a domain you actually own.
Now you need to get the external address of your cluster, run the command
kubectlgetservices-ningress-nginx
and write down the External IP assigned to the LoadBalancer.
Depending on the cloud provider you are using it can be an IPv4, an IPv6 or a domain. On AWS for example, it will be a domain like xxx.elb.eu-west-1.amazonaws.com.
If you see <pending>, wait a few seconds and try again.
Once you have the address, create the following DNS records:
If the address you got was an IPv4 (x.x.x.x), create a A record instead of a CNAME.
If the address you got was ans IPv6 (y:y:y:y:y:y:y:y), create a AAAA record.
https://onyxia.my-domain.net will be the URL for your instance of Onyxia. The URL of the services created by Onyxia are going to look like: https://<something>.lab.my-domain.net
You can customise "onyxia" and "lab" to your liking, for example you could chose datalab.my-domain.net and *.kub.my-domain.net.
SSL
In this section we will obtain a TLS certificate issued by LetsEncrypt using the certbot commend line tool then get our ingress controller to use it.
If you are already familiar with certbot you're probably used to run it on a remote host via SSH. In this case you are expected to run it on your own machine, we'll use the DNS chalenge instead of the HTTP chalenge.
brewinstallcertbot#On Mac, lookup how to install certbot for your OS#Because we need a wildcard certificate we have to complete the DNS callange. sudocertbotcertonly--manual--preferred-challengesdns# When asked for the domains you wish to optains a certificate for enter:# onyxia.my-domain.net *.lab.my-domain.net
The obtained certificate needs to be renewed every three month.
To avoid the burden of having to remember to re-run the certbot command periodically you can setup cert-manager and configure a DNS01 challenge provider on your cluster but that's out of scope for Onyxia.
You may need to delegate your DNS Servers to one of the supported DNS service provider.
Now we want to create a Kubernetes secret containing our newly obtained certificate:
https://onyxia.my-domain.net will be the URL for your instance of Onyxia.
The URL of the services created by Onyxia are going to look like: https://xxx.lab.my-domain.net
You can customise "onyxia" and "lab" to your liking, for example you could chose datalab.my-domain.net and *.kub.my-domain.net.
SSL
In this section we will obtain a TLS certificate issued by LetsEncrypt using the certbot commend line tool.
brewinstallcertbot#On Mac, lookup how to install certbot for your OS# Because we need a wildcard certificate we have to complete the DNS callange. sudocertbotcertonly--manual--preferred-challengesdns# When asked for the domains you wish to optains a certificate for enter:# onyxia.my-domain.net *.lab.my-domain.net
The obtained certificate needs to be renewed every three month.
To avoid the burden of having to remember to re-run the certbot command periodically you can setup cert-manager and configure a DNS01 challenge provider on your cluster but that's out of scope for Onyxia.
You may need to delegate your DNS Servers to one of the supported DNS service provider.
Now we want to create a Kubernetes secret containing our newly obtained certificate:
You have a Kubernetes cluster and kubectl configured
onyxia.my-domain.net and *.lab.my-domain.net are pointing to your cluster's external address. my-domain.net being a domain that you own. You can customise "onyxia" and "lab" to your liking, for example you could chose datalab.my-domain.net and *.kub.my-domain.net.
You have an ingress controller configured with a default TLS certificate for *.lab.my-domain.net and onyxia.my-domain.net.
Through out this guide we make as if everything was instantaneous. In reality if you are testing on a small cluster you will need to wait several minutes after hitting helm install for the services to be ready.
Use kubectl get pods to see if your pods are up and ready.
(Optional) Make sure that your cluster is ready for Onyxia
To make sure that your Kubernetes cluster is correctly configured let's deploy a test web app on it before deploying Onyxia.
DOMAIN=my-domain.netcat<<EOF>./test-spa-values.yamlingress: enabled: true annotations: kubernetes.io/ingress.class: nginx hosts: - host: test-spa.lab.$DOMAINEOFhelmrepoaddetalabhttps://etalab.github.io/helm-chartshelminstalltest-spaetalab/keycloakify-demo-app-ftest-spa-values.yamlecho"Navigate to https://test-spa.lab.$DOMAIN, see the Hello World"helmuninstalltest-spa
You can now access https://onyxia.my-domain.net and start services. Congratulations! đĨŗ
You have the ability to customize the user interface (UI) of Onyxia through the provision of specific environment variables to the UI. For details on the available options, please consult the 'UI Customization' section of this file.
If you are unsure about how to supply these variables, refer to the later section of this guide where we discuss how to provide the KEYCLOAK_* parameters. You'll then be able to add your UI-related parameters alongside them.
Enabling user authentication
At the moment there is no authentication process, everyone can access our platform and and start services.
Let's setup Keycloak to enable users to create account and login to our Onyxia.
Notes if you already have a Keycloak server
If you already have a Keycloak server it is up to you to pick from this guide what is rellevent to you.
Main takeway is that you probably want to load the Onyxia custom Keycloak theme and enable -Dkeycloak.profile=preview in order to be able to enforce that usernames are well formatted and define an accept list of email domains allowed to create account on your Onyxia instance.
That out of the way, note that you can configure onyxia-web to integrate with your existing Keycloak server, you just need to set some dedicated environment variable in the values.yaml of the onyxia helm chart. Example:
web:env:# Available env are documented here: https://github.com/InseeFrLab/onyxia-web/blob/main/.envKEYCLOAK_URL:https://auth.lab.my-domain.net/authKEYCLOAK_CLIENT_ID:onyxiaKEYCLOAK_REALM:datalabJWT_EMAIL_CLAIM:emailJWT_FAMILY_NAME_CLAIM:family_nameJWT_FIRST_NAME_CLAIM:given_nameJWT_USERNAME_CLAIM:preferred_usernameJWT_LOCALE_CLAIM:locale
helmrepoaddcodecentrichttps://codecentric.github.io/helm-chartsDOMAIN=my-domain.netPOSTGRESQL_PASSWORD=xxxxx#Replace by a strong password, you will never need it.# Credentials for logging to https://auth.lab.$DOMAIN/authKEYCLOAK_USER=adminKEYCLOAK_PASSWORD=yyyyyycat<<EOF>./keycloak-values.yamlimage: # We use the legacy variant of the image until codecentric update it's helm chart tag: "19.0.3-legacy"replicas: 1extraInitContainers: | - name: realm-ext-provider image: curlimages/curl imagePullPolicy: IfNotPresent command: - sh args: - -c - | # There is a custom theme published alongside every onyxia-web release # The version of the Keycloak theme and the version of onyxia-web don't need # to match but you should update the theme from time to time. # https://github.com/InseeFrLab/onyxia-web/releases curl -L -f -S -o /extensions/onyxia.jar https://github.com/InseeFrLab/onyxia-web/releases/download/v2.29.4/keycloak-theme.jar volumeMounts: - name: extensions mountPath: /extensionsextraVolumeMounts: | - name: extensions mountPath: /opt/jboss/keycloak/standalone/deploymentsextraVolumes: | - name: extensions emptyDir: {}extraEnv: | - name: KEYCLOAK_USER value: $KEYCLOAK_USER - name: KEYCLOAK_PASSWORD value: $KEYCLOAK_PASSWORD - name: JGROUPS_DISCOVERY_PROTOCOL value: kubernetes.KUBE_PING - name: KUBERNETES_NAMESPACE valueFrom: fieldRef: apiVersion: v1 fieldPath: metadata.namespace - name: KEYCLOAK_STATISTICS value: "true" - name: CACHE_OWNERS_COUNT value: "2" - name: CACHE_OWNERS_AUTH_SESSIONS_COUNT value: "2" - name: PROXY_ADDRESS_FORWARDING value: "true" - name: JAVA_OPTS value: >- -Dkeycloak.profile=preview -XX:+UseContainerSupport -XX:MaxRAMPercentage=50.0 -Djava.net.preferIPv4Stack=true -Djava.awt.headless=true ingress: enabled: true servicePort: http annotations: kubernetes.io/ingress.class: nginx ## Resolve HTTP 502 error using ingress-nginx: ## See https://www.ibm.com/support/pages/502-error-ingress-keycloak-response nginx.ingress.kubernetes.io/proxy-buffer-size: 128k rules: - host: "auth.lab.$DOMAIN" paths: - path: / pathType: Prefix tls: - hosts: - auth.lab.$DOMAINpostgresql: postgresqlPassword: $POSTGRESQL_PASSWORDEOFhelminstallkeycloakcodecentric/keycloak-fkeycloak-values.yaml
You can now login to the administration console of https://auth.lab.my-domain.net and login using the credentials you have defined with KEYCLOAK_USER and KEYCLOAK_PASSWORD.
Create a realm called "datalab" (or something else), go to Realm settings
On the tab General
User Profile Enabled: On
On the tab login
User registration: On
Forgot password: On
Remember me: On
On the tab email, we give an example with **** AWS SES, if you don't have a SMTP server at hand you can skip this by going to Authentication (on the left panel) -> Tab Required Actions -> Uncheck "set as default action" Verify Email. Be aware that with email verification disable, anyone will be able to sign up to your service.
From: noreply@lab.my-domain.net
Host: email-smtp.us-east-2.amazonaws.com
Port: 465
Authentication: enabled
Username: **************
Password: ***************************************
When clicking "save" you'll be asked for a test email, you have to provide one that correspond to a pre-existing user or you will get a silent error and the credentials won't be saved.
On the tab Themes
Login theme: onyxia-web (you can also select the login theme on a per client basis)
Email theme: onyxia-web
On the tab Localization
Internationalization: Enabled
Supported locales: <Select the languages you wish to support>
In Authentication (on the left panel) -> Tab Required Actions enable and set as default action Therms and Conditions.
Now you want to ensure that the username chosen by your users complies with Onyxia requirement (only alphanumerical characters) and define a list of email domain allowed to register to your service.
Go to Realm Settings (on the left panel) -> Tab User Profile (this tab shows up only if User Profile is enabled in the General tab and you can enable user profile only if you have started Keycloak with -Dkeycloak.profile=preview) -> JSON Editor.
Now you can edit the file as suggested in the following DIFF snippet. Be mindful that in this example we only allow emails @gmail.com and @hotmail.com to register you want to edit that.
Now our Keycloak server is fully configured we just need to update our Onyxia deployment to let it know about it.
Update the onyxia-values.yaml file that you created previously, don't forget to replace all the occurence of my-domain.net by your actual domain.
Don't forget as well to remplace the terms of services of the sspcloud by your own terms of services. CORS should be enabled on those .md links (Access-Control-Allow-Origin: *).
Now your users should be able to create account, log-in, and start services on their own Kubernetes namespace.
S3 Storage
Onyxia-web use AWS Security Token Service API to get token and empowered user with storage features. We support any S3 storage compatible with this API. In this context, we are using MinIO, which is compatible with the Amazon S3 storage service and we demonstrate how to integrate it with Keycloak.
Create a Keycloak client for Accessing Keycloak
Before configuring MinIO, let's create a new client for Keycloak (from the previous existing "datalab" realm).
Create a client called "minio".
Client ID: minio
Client Protocol: openid-connect
Root URL: https://minio.lab.my-domain.net/
Complete the content of client "minio" with the following values.
Access Type: confidential
Valid Redirect URIs (two values are required): https://minio.lab.my-domain.net/* and https://minio-console.lab.my-domain.net/*
Web origins: *
Save the content, a new tab called Credentials must be appear. Navigate to Credentials tab and copy the secret value for the next section.
Navigate to Mappers tab and create a protocol Mapper.
Name: policy
Mapper Type: Hardcoded claim
Complete the content of Mapper "policy" with the following values.
Token Claim Name: policy
Claim value: stsonly
Add to ID token: on
Add to access token: on
Add to userinfo: on
Install MinIO
We recommand you to follow MinIO documentation for this installation and you must activate OIDC authentification. We will use the official Helm in this tutorial. All Helm configuration values can be found within this link.
Replace COPY_SECRET_FROM_KEYCLOAK_MINIO_CLIENT by the secret value defined into the "minio" Keycloak client (see previous section).
MinIO is now deployed and is accessible on the console url.
By default, there are 16 MinIO containers running. If this number is too large for your Kubernetes cluster, you can limit it by configuring the 'replicas' key.
Create a Keycloak Client for Onyxia/MinIO
Before configuring the onyxia region to create tokens we should go back to Keycloak and create a new client to enable onyxia-web to request token for MinIO. This client is a little bit more complexe than other if you want to manage durations (here 7 days) and this client should have a claim name policy and with a value of stsonly according to our last deployment of MinIO.
From "datalab" realm, create a client called "onyxia-minio"
Client ID: onyxia-minio
Client Protocol: openid-connect
Root URL: https://onyxia.my-domain.net/
Complete the content of client "onyxia-minio" with the following values.
Advanced Settings
1. Access Token Lifespan : 7 days
2. Client Session Idle : 7 days
3. Client Session Max: 7 days
Save the content and navigate to Mappers tab and create two protocol Mappers.
Create the first Mapper called "policy".
Token Name: policy
Mapper Type: Hardcoded claim
Token Claim Name: policy
Claim value: stsonly
Add to ID token: on
Add to access token: on
Add to userinfo: on
Create the second Mapper called "audience-minio".
Token Name: audience-minio
Mapper Type: Audience
_Included Custom Audience _: minio
Add to ID token: on
Add to access token: on
Update Onyxia
S3 storage is configured inside a region in Onyxia api. You have some options to configure this storage and let inform Onyxia web all needed informations how to generate those tokens : keycloak parameters to access storage API, duration of STS tokens, bucket name with a standard prefix and a claim in the user JWT token to generate a unique identifiant for this bucket name, whether Onyxia-web should try to to create this bucket silently or not. There is also options for projects. You should look all options for the version of your need on github
Onyxia-web use vault as a storage for two kinds of secrets :
1. secrets or information generate by Onyxia to store differents values (ui preferences for example)
2. user secrets
Vault must be configured with JWT or OIDC authentification methods.
As vault need to be initialized with a master key, It can't be directly configured with all parameters such as oidc or access policies and roles. So first step we create a vault with dev mode (do not use this in production and do your initialization with any of the recommanded configuration : shamir, gcp, another vault)